Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python

Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Pure Python

Features

• Supports reading metadata and imaging data for:

  • OME-TIFF
  • TIFF
  • CZI — (pip install aicsimageio[czi])
  • LIF — (pip install readlif>=0.6.4)
  • ND2 — (pip install aicsimageio[nd2])
  • DV — (pip install aicsimageio[dv])
  • PNG, GIF, etc. — (pip install aicsimageio[base-imageio])
  • Files supported by Bio-Formats — (pip install aicsimageio bioformats_jar)

• Supports writing metadata and imaging data for:

  • OME-TIFF
  • PNG, GIF, etc. — (pip install aicsimageio[base-imageio])

• Supports reading and writing to fsspec supported file systems wherever possible:

  • Local paths

     

     

     

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