Gapmm2: gapped alignment using minimap2 (align transcripts to genome)

This tool is a wrapper for minimap2 to run spliced/gapped alignment, ie aligning transcripts to a genome. You are probably saying, yes minimap2 runs this with -x splice –cs option (you are correct). However, there are instances where the terminal exons from stock minimap2 alignments are missing. This tool detects those alignments that have unaligned terminal eons and uses edlib to find the terminal exon positions. The tool then updates the PAF output file with the updated information. Rationale We […]

Read more

Versionsverwaltung & Open Source Hausaufgabe

Herzlich Willkommen zu dieser Hausaufgabe für unseren MOOC: Let’s Git! Wir hoffen, dass Du viel lernen wirst und dabei auch Spaß hast. In dieser Hausaufgabe wirst du eine Webseite zu deinem Lieblingscharakter aus Filmen oder Büchern erstellen. Hier kannst du zwei Beispiele betrachten: Beispiel 1 und Beispiel 2. Du wirst hier den Github Flow üben, aber das wirst du dann in den Aufgaben erkennen. Um die Aufgabe zu starten, folge einfach folgenden Schritten: Nutze dieses Repository als Vorlage für ein […]

Read more

A python package for binomial confidence intervals

Pynomial (pronounced like “binomial”) is a lightweight python library for implementing the many confidence intervals for the risk parameter of a binomial model. Pynomial is more or less a python port of the R library {binom} by Sundar Dorai-Raj. As a point of philosophy and until otherwise stated, if {binom} does a thing then so should pynomial (e.g. error throwing or handling cases when the number of successes is the same as the number of trials). The following confidence intervals […]

Read more

Simple script to create VBscript of exe and inject to xlsm

Executable file injection to Excel documents (.xlsm) 📄 Description Simple python script to create xlsm dropper of given executable file. You can change code or expand it for another Office extensions 📺 How to use python3 exe-to-xlsm.py -i input_file.exe –xlsm output_document.xlsm ❗ Notice This script can be used to deliver potential dangerous software, so use it only for educational purposes or for self-practicing Do not distribute Do not use for malicious purposes GitHub View Github    

Read more

Simple Python Script to Parse Apache Log, Get all Unique IPs and Urls visited by that IP

Simple Python Script to Parse Apache Log, Get all Unique IPs and Urls visited by that IP. It will create 3 different files. allIP.txt – Contains all the IPs in raw uniqueIP.txt – Contains all unique IP’s ipAndUrl.txt – Contains list of Urls visited by that particular IP. git clone https://github.com/KathanP19/Parse_Apache_Log cd Parse_Apache_Log Usage: parse_log.py [options] Options: -h, –help show this help message and exit -f FILE, –file=FILE Path of you apache log file. -v, –verbose Verbose Mode. python3 parse_log.py […]

Read more

ABScanner – Python script that looks for open ports/targets

Python script that looks for open ports/targets Using You must specify a target or a network with the subnet mask Type of scans: If you just put the target, the scanner script with all types of scans: ./scanner.py 192.168.0.10 ./scanner.py 192.168.0.10/24 To choose a type of scan, you have to specify it (it doesn’t care about the case); ./scanner.py syn 192.168.0.10 ./scanner.py ICMP 192.168.0.10/24 ./scanner.py arp 10.10.10.10/16 ./scanner.py UDP 192.168.0.254 GitHub View Github    

Read more

A python script for combining multiple native SU2 format meshes into one mesh file for multi-zone simulations

A python script for combining multiple native SU2 format meshes into one mesh file for multi-zone simulations. Run the python script in the directory your mesh files are located and follow the instructions. References; https://su2code.github.io/docs_v7/Multizone/ https://su2foundation.org/wp-content/uploads/2020/06/Kattmann.pdf GitHub View Github    

Read more

A python script to crack the account efbeh:v

Menu & Fitur Crack Instal On Termux $ pkg update && pkg upgrade $ pkg install python2 git -y $ git clone https://github.com/AngCyer/Face-Crack $ cd Face-Crack $ pip2 install -r bahan.bakar $ chmod +x * $ ls $ python2 face.py Donate Dana : 083806858479 Pulsa : 081392979518 Thank For Your Support GitHub View Github    

Read more
1 4 5 6 7 8 18