scAR (single cell Ambient Remover) is a package for denoising multiple single cell omics data. It can be used for multiple tasks, such as, sgRNA assignment for scCRISPRseq, identity barcode assignment for cell indexing, protein denoising for CITE-seq, mRNA denoising for scRNAseq, and etc… It is built using probabilistic deep learning, illustrated as follows: Installation Clone this repository, $ git clone https://github.com/CaibinSh/scAR.git To install the dependencies, create a conda environment:

Lets you remove all friends, leave GCs, and leave servers, in an instant! You can also do each of them by themselves. First, you need to get python, at . Next you need to download the file, by hitting the “code” button and hitting “download ZIP” Unzip the folder. Once you are done, goto the address bar on your explorer window while in the anonymity folder. Type in “cmd” and hit enter. Type in “pip install requirements.txt” (without quotations). Once […]

Improve your Sphinx build time by selectively removing TocTree objects from pages.This is useful if your documentation uses auto-generated API documentation, whichgenerates a lot of stub pages This extension can be used to remove the sidebar links for just the pages you specify, speed up the build considerably. Who is this for? This package is for maintainers that use Sphinx and have really large API documentation (or for some other reason, have a ton of nested pages).If you use a […]